STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THII_3427Hypothetical protein. (951 aa)    
Predicted Functional Partners:
THII_1291
roadblock/LC7 family protein.
  
 
 0.746
THII_2062
roadblock/LC7 family protein.
  
 
 0.746
THII_3426
Putative phosphoesterase.
 
     0.709
ftsY
Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.
   
 0.703
THII_2950
Cyclic nucleotide-binding protein.
  
     0.522
THII_2510
Membrane protease subunit, stomatin/prohibitin.
  
 
   0.501
THII_3283
PDK repeat-containing protein.
  
     0.480
THII_1822
WD repeat-containing protein.
  
     0.465
THII_2524
Sulfotransferase family protein.
  
     0.439
THII_2093
Biopolymer transporter.
  
     0.422
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.