STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_3453HNH endonuclease. (462 aa)    
Predicted Functional Partners:
THII_0160
Transposase IS605.
  
     0.694
THII_3452
Hypothetical protein.
       0.550
THII_1230
Putative site-specific integrase-resolvase.
  
     0.515
THII_0024
Molecular chaperone TorD.
  
     0.512
THII_1143
Resolvase.
  
     0.511
THII_1146
Resolvase.
  
     0.488
THII_1229
Putative site-specific integrase-resolvase.
  
     0.465
THII_0159
Site-specific integrase-resolvase.
  
     0.451
THII_0025
Polysulfide reductase NrfD.
  
     0.444
THII_0164
Resolvase-like protein.
  
     0.423
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.