STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_3532ABC-type Fe3+-hydroxamate transport system, periplasmic component. (318 aa)    
Predicted Functional Partners:
THII_1790
Fe(3+)-siderophore ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.997
THII_1789
Ferrichrome transport ATP-binding protein FhuC.
 
 
 0.990
THII_3533
Putative neutral zinc metallopeptidase.
       0.701
THII_3534
Hypothetical protein.
       0.548
THII_2208
Polyketide synthase.
  
 
 0.546
cysG
uroporphyrin-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family.
     
 0.515
THII_1943
Hydantoinase/oxoprolinase.
     
 0.498
THII_1050
Amino acid adenylation enzyme/thioester reductase family protein.
  
  
 0.479
THII_3535
Auxin efflux carrier.
       0.471
THII_3343
B12-dependent methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.467
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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