STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_3568Anti-sigma-factor antagonist. (100 aa)    
Predicted Functional Partners:
THII_3569
Toluene tolerance protein.
  
 
 0.982
THII_3570
Mce related protein.
  
 0.968
THII_2109
ABC transporter.
  
 0.885
THII_3173
Iron ABC transporter ATP-binding protein.
  
 0.875
THII_0599
ABC-type transport system involved in resistance to organic solvents, periplasmic component.
  
 0.869
THII_2110
ABC transporter permease.
  
 0.869
THII_2464
Hypothetical protein.
  
 0.857
THII_3566
Metal-dependent hydrolase.
       0.790
THII_3567
ABC transporter.
       0.779
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.