STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_3621Hypothetical protein. (1029 aa)    
Predicted Functional Partners:
THII_2468
PAS sensor protein.
   0.933
THII_2177
Chemotaxis protein histidine kinase CheA.
 
 
 0.890
THII_0554
CheA signal transduction histidine kinase.
 
 
 0.882
THII_2176
Chemotaxis protein CheW.
 
 
 0.866
THII_0553
CheW protein.
 
 
 0.860
THII_1954
Signal transduction histidine kinase.
  
 
0.853
THII_0968
Signal transduction histidine kinase.
 
 
 0.844
THII_1988
Chemotaxis protein histidine kinase-like protein.
 
 
 0.844
THII_0636
Signal transduction histidine kinase.
  
 
 0.842
THII_1283
Chemotaxis protein histidine kinase-like protein.
 
 
 0.838
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.