STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_3651Cysteine protease. (465 aa)    
Predicted Functional Partners:
THII_3652
Hypothetical protein.
 
     0.781
THII_0276
Clostripain.
  
    0.634
THII_2183
Proteinase inhibitor I4, serpin; Belongs to the serpin family.
  
 0.630
THII_2906
Hypothetical protein.
  
     0.595
THII_0792
Transcription factor, MBF1.
  
     0.572
THII_0989
Glycosyltransferase.
  
    0.563
THII_0340
Radical SAM domain-containing protein.
  
     0.554
THII_2321
Hypothetical protein.
  
     0.537
THII_0535
Sigma-70 region 4 domain-containing protein.
  
     0.532
THII_0274
Two-component system sensor histidine kinase/response regulator.
  
     0.522
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.