STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_3654Heme d1 biosynthesis protein. (344 aa)    
Predicted Functional Partners:
THII_3653
Membrane protein.
       0.773
THII_2880
Heme biosynthesis protein.
  
 0.704
THII_2881
AsnC family transcriptional regulator.
  
 0.646
THII_2878
Transcriptional regulator.
  
 0.643
THII_2877
Cytochrome d1 heme subunit.
 
  
 0.624
THII_2876
C-type cytochrome c55x.
 
    0.612
THII_2316
Radical SAM protein.
 
  
 0.594
THII_2879
Protein nirL.
 
  
 0.561
THII_1713
Radical SAM protein.
  
     0.555
THII_3196
Radical SAM domain-containing protein.
 
  
 0.529
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.