Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THII_3673Tellurite resistance protein TerB. (146 aa)    
Predicted Functional Partners:
THII_3671
Transposase.
       0.562
THII_3672
Transposase.
       0.562
THII_0977
Hypothetical protein.
  
     0.561
THII_3354
Ribonuclease T2; Belongs to the RNase T2 family.
  
     0.515
THII_3561
Hypothetical protein.
  
     0.484
THII_3674
Hypothetical protein.
       0.437
THII_0597
Hypothetical protein.
  
     0.422
THII_2131
Hypothetical protein.
  
     0.421
THII_1652
Sulfotransferase family protein.
  
     0.420
THII_3852
Endonuclease/exonuclease/phosphatase.
  
     0.420
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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