STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_3693Pyruvate:ferredoxin oxidoreductase, alpha subunit. (390 aa)    
Predicted Functional Partners:
THII_3692
Pyruvate:ferredoxin oxidoreductase, beta subunit.
 0.999
THII_3694
Pyruvate:ferredoxin oxidoreductase, gamma subunit.
 
 0.999
THII_2889
Ferredoxin.
 
 
 0.987
THII_0463
Bifunctional malic enzyme oxidoreductase/phosphotransacetylase.
  
 
 0.940
THII_3315
Nickel-dependent hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
   
 
 0.939
THII_3690
NADPH-dependent glutamate synthase beta chain - like protein.
 
 
 0.938
THII_1281
Phosphotransacetylase.
    
 0.935
THII_2459
Hydrogenase (NiFe) small subunit HydA.
   
 
 0.927
THII_2462
Hydrogenase (NiFe) small subunit HydA.
   
 
 0.927
acsA
acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.923
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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