Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
THII_3694Pyruvate:ferredoxin oxidoreductase, gamma subunit. (193 aa)    
Predicted Functional Partners:
THII_3692
Pyruvate:ferredoxin oxidoreductase, beta subunit.
 
 0.999
THII_3693
Pyruvate:ferredoxin oxidoreductase, alpha subunit.
 
 0.999
THII_0619
Protein involved in sulfur oxidation DsrL.
 0.976
THII_3690
NADPH-dependent glutamate synthase beta chain - like protein.
 
 0.957
THII_0463
Bifunctional malic enzyme oxidoreductase/phosphotransacetylase.
    
 0.952
THII_1281
Phosphotransacetylase.
    
 0.946
acsA
acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.923
THII_3339
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.923
THII_0839
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.920
THII_3783
Citrate synthase; Belongs to the citrate synthase family.
     
 0.920
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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