Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
THII_3691 | THII_3692 | Zinc finger protein. | Pyruvate:ferredoxin oxidoreductase, beta subunit. | 0.628 |
THII_3691 | THII_3693 | Zinc finger protein. | Pyruvate:ferredoxin oxidoreductase, alpha subunit. | 0.596 |
THII_3691 | THII_3694 | Zinc finger protein. | Pyruvate:ferredoxin oxidoreductase, gamma subunit. | 0.596 |
THII_3691 | THII_3695 | Zinc finger protein. | Hypothetical protein. | 0.451 |
THII_3692 | THII_3691 | Pyruvate:ferredoxin oxidoreductase, beta subunit. | Zinc finger protein. | 0.628 |
THII_3692 | THII_3693 | Pyruvate:ferredoxin oxidoreductase, beta subunit. | Pyruvate:ferredoxin oxidoreductase, alpha subunit. | 0.999 |
THII_3692 | THII_3694 | Pyruvate:ferredoxin oxidoreductase, beta subunit. | Pyruvate:ferredoxin oxidoreductase, gamma subunit. | 0.999 |
THII_3692 | THII_3695 | Pyruvate:ferredoxin oxidoreductase, beta subunit. | Hypothetical protein. | 0.544 |
THII_3693 | THII_3691 | Pyruvate:ferredoxin oxidoreductase, alpha subunit. | Zinc finger protein. | 0.596 |
THII_3693 | THII_3692 | Pyruvate:ferredoxin oxidoreductase, alpha subunit. | Pyruvate:ferredoxin oxidoreductase, beta subunit. | 0.999 |
THII_3693 | THII_3694 | Pyruvate:ferredoxin oxidoreductase, alpha subunit. | Pyruvate:ferredoxin oxidoreductase, gamma subunit. | 0.999 |
THII_3693 | THII_3695 | Pyruvate:ferredoxin oxidoreductase, alpha subunit. | Hypothetical protein. | 0.572 |
THII_3694 | THII_3691 | Pyruvate:ferredoxin oxidoreductase, gamma subunit. | Zinc finger protein. | 0.596 |
THII_3694 | THII_3692 | Pyruvate:ferredoxin oxidoreductase, gamma subunit. | Pyruvate:ferredoxin oxidoreductase, beta subunit. | 0.999 |
THII_3694 | THII_3693 | Pyruvate:ferredoxin oxidoreductase, gamma subunit. | Pyruvate:ferredoxin oxidoreductase, alpha subunit. | 0.999 |
THII_3694 | THII_3695 | Pyruvate:ferredoxin oxidoreductase, gamma subunit. | Hypothetical protein. | 0.572 |
THII_3695 | THII_3691 | Hypothetical protein. | Zinc finger protein. | 0.451 |
THII_3695 | THII_3692 | Hypothetical protein. | Pyruvate:ferredoxin oxidoreductase, beta subunit. | 0.544 |
THII_3695 | THII_3693 | Hypothetical protein. | Pyruvate:ferredoxin oxidoreductase, alpha subunit. | 0.572 |
THII_3695 | THII_3694 | Hypothetical protein. | Pyruvate:ferredoxin oxidoreductase, gamma subunit. | 0.572 |