STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_3738Nitrogen fixation protein NifM. (303 aa)    
Predicted Functional Partners:
THII_3085
Nitrogen fixation protein NifZ.
   
 0.835
THII_1809
Nitrogen fixation protein NifT.
 
  
 0.662
THII_2571
PAS/PAC sensor signal transduction histidine kinase.
  
 
 
 0.634
guaA
Bifunctional GMP synthase/glutamine amidotransferase protein; Catalyzes the synthesis of GMP from XMP.
       0.622
THII_3736
Phosphoglycerate/bisphosphoglycerate mutase; Belongs to the phosphoglycerate mutase family.
       0.618
THII_1761
PpiC-type peptidyl-prolyl cis-trans isomerase.
  
     0.535
THII_0143
Parvulin-like peptidyl-prolyl isomerase.
  
     0.526
THII_1811
NifY protein.
 
  
 0.526
THII_3087
Hypothetical protein.
 
 
   0.522
THII_3125
NifQ family protein.
 
  
 0.512
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.