STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_3836Ferritin-like domain containing protein; Iron-storage protein. (174 aa)    
Predicted Functional Partners:
THII_0066
Hypothetical protein.
  
  
 0.824
THII_1217
ATP-dependent DNA helicase RecQ.
 
  
   0.697
THII_3303
Antioxidant, AhpC/Tsa family protein.
  
  
 0.610
def-2
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
     
 0.532
THII_3837
Amino acid-binding protein.
       0.511
THII_2340
Rubredoxin.
  
  
 0.459
THII_3834
Sensory transduction histidine kinase.
     
 0.450
rpsP
30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
   
    0.434
THII_3835
Sensor protein.
  
  
 0.426
THII_3833
Response regulator receiver protein.
     
 0.403
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.