Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| THII_0732 | THII_3867 | THII_0732 | THII_3867 | Hypothetical protein. | Fe(2+)-trafficking protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | 0.453 |
| THII_0850 | THII_3867 | THII_0850 | THII_3867 | Stringent starvation protein B. | Fe(2+)-trafficking protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | 0.613 |
| THII_0850 | apaH | THII_0850 | THII_2288 | Stringent starvation protein B. | Bis(5'-nucleosyl)-tetraphosphatase, symmetrical; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. | 0.596 |
| THII_0850 | ftsB | THII_0850 | THII_0361 | Stringent starvation protein B. | Cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. | 0.762 |
| THII_0850 | rpmF | THII_0850 | THII_3589 | Stringent starvation protein B. | 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.587 |
| THII_0850 | secE | THII_0850 | THII_2725 | Stringent starvation protein B. | Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family. | 0.673 |
| THII_3865 | THII_3866 | THII_3865 | THII_3866 | Pyridoxamine 5'-phosphate oxidase. | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.410 |
| THII_3865 | THII_3867 | THII_3865 | THII_3867 | Pyridoxamine 5'-phosphate oxidase. | Fe(2+)-trafficking protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | 0.410 |
| THII_3866 | THII_3865 | THII_3866 | THII_3865 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Pyridoxamine 5'-phosphate oxidase. | 0.410 |
| THII_3866 | THII_3867 | THII_3866 | THII_3867 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Fe(2+)-trafficking protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | 0.948 |
| THII_3867 | THII_0732 | THII_3867 | THII_0732 | Fe(2+)-trafficking protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | Hypothetical protein. | 0.453 |
| THII_3867 | THII_0850 | THII_3867 | THII_0850 | Fe(2+)-trafficking protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | Stringent starvation protein B. | 0.613 |
| THII_3867 | THII_3865 | THII_3867 | THII_3865 | Fe(2+)-trafficking protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | Pyridoxamine 5'-phosphate oxidase. | 0.410 |
| THII_3867 | THII_3866 | THII_3867 | THII_3866 | Fe(2+)-trafficking protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.948 |
| THII_3867 | apaH | THII_3867 | THII_2288 | Fe(2+)-trafficking protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | Bis(5'-nucleosyl)-tetraphosphatase, symmetrical; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. | 0.481 |
| THII_3867 | ftsB | THII_3867 | THII_0361 | Fe(2+)-trafficking protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | Cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. | 0.472 |
| THII_3867 | rpmF | THII_3867 | THII_3589 | Fe(2+)-trafficking protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.447 |
| THII_3867 | secE | THII_3867 | THII_2725 | Fe(2+)-trafficking protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family. | 0.488 |
| apaH | THII_0850 | THII_2288 | THII_0850 | Bis(5'-nucleosyl)-tetraphosphatase, symmetrical; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. | Stringent starvation protein B. | 0.596 |
| apaH | THII_3867 | THII_2288 | THII_3867 | Bis(5'-nucleosyl)-tetraphosphatase, symmetrical; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. | Fe(2+)-trafficking protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | 0.481 |
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