Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
THII_3900Beta-lactamase. (308 aa)    
Predicted Functional Partners:
THII_2353
Transmembrane sensor domain-containing protein.
 
     0.727
THII_1455
Family 3 adenylate cyclase.
 
     0.698
THII_2089
Family 3 adenylate cyclase.
 
     0.693
THII_1583
Adenylate/guanylate cyclase.
 
     0.690
THII_0449
PAS domain-containing protein.
 
     0.683
THII_1632
Adenylyl cyclase class-3/4/guanylyl cyclase.
 
     0.681
THII_3622
Adenylate/guanylate cyclase.
 
     0.676
THII_3901
Metal-dependent hydrolase, beta-lactamase superfamily III.
     
 0.606
THII_1316
Adenylate/guanylate cyclase; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
 
     0.587
THII_3571
Adenylate/guanylate cyclase.
 
     0.571
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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