Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THII_3902Response regulator receiver protein. (131 aa)    
Predicted Functional Partners:
THII_3415
Histidine kinase-like protein.
 
   0.810
THII_3345
Response regulator receiver protein.
  
 
   0.780
THII_0061
Hypothetical protein.
  
   0.772
THII_3792
Signal transduction histidine kinase.
  
 
   0.742
THII_1847
Signal transduction histidine kinase.
 
   0.735
THII_0802
Two-component response regulator.
  
 
   0.732
THII_1517
Response regulator receiver protein.
  
 
 
 0.731
THII_0444
Signal transduction histidine kinase.
  
 
   0.709
THII_0540
Response regulator receiver protein.
  
 
   0.709
THII_0636
Signal transduction histidine kinase.
 
 
 0.703
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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