STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_3940TPR repeat-containing protein. (733 aa)    
Predicted Functional Partners:
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
       0.773
THII_1569
Methyltransferase.
 
      0.657
THII_3165
Cytochrome c assembly protein.
  
 
 0.645
THII_3942
Hypothetical protein.
       0.631
THII_0655
Hypothetical protein.
 
      0.584
THII_0364
Glycosyltransferase.
 
     0.553
THII_1820
Calmodulin.
  
     0.502
THII_3251
Cytochrome c biogenesis protein; Possible subunit of a heme lyase.
  
  
 0.482
THII_2080
TPR repeat containing protein.
 
 
0.442
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.