STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X975_01691Ubiquitin thioesterase Zranb1. (702 aa)    
Predicted Functional Partners:
X975_07808
Polyubiquitin-C.
   
 0.958
X975_16292
Ubiquitin-60S ribosomal protein L40.
    
  0.950
X975_19696
UBX domain-containing protein 7.
   
   0.880
X975_09582
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.757
X975_05104
Mitogen-activated protein kinase kinase kinase 9.
   
 0.743
X975_07566
Uncharacterized protein.
    
  0.730
X975_07570
Uncharacterized protein.
    
  0.730
X975_10680
Nuclear protein localization protein 4-like protein.
    
 
 0.726
X975_08265
Uncharacterized protein.
    
  0.700
X975_08266
Uncharacterized protein.
    
  0.700
Your Current Organism:
Stegodyphus mimosarum
NCBI taxonomy Id: 407821
Other names: S. mimosarum
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.