STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X975_11327Bardet-Biedl syndrome 1 protein. (150 aa)    
Predicted Functional Partners:
X975_17841
Tetratricopeptide repeat protein 8.
   
 0.986
X975_16329
Bardet-Biedl syndrome 5 protein-like protein.
    
 0.981
X975_14576
Bardet-Biedl syndrome 4 protein.
   
 0.979
X975_12721
BBS2_Mid domain-containing protein.
   
 0.974
X975_16409
Bardet-Biedl syndrome 2 protein.
   
 0.966
X975_16411
Bardet-Biedl syndrome 2 protein-like protein.
   
 0.966
X975_25244
Bardet-Biedl syndrome 1 protein.
 
  
  0.963
X975_25245
Bardet-Biedl syndrome 1 protein.
 
  
  0.951
X975_18116
Protein PTHB1.
    
 0.910
X975_18117
Protein PTHB1.
    
 0.910
Your Current Organism:
Stegodyphus mimosarum
NCBI taxonomy Id: 407821
Other names: S. mimosarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.