STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X975_25606Gem-associated protein 5. (121 aa)    
Predicted Functional Partners:
X975_16366
RNA polymerase-associated protein LEO1.
   
 0.943
X975_16907
Putative ATP-dependent RNA helicase DDX20.
   
 0.935
X975_16908
Putative ATP-dependent RNA helicase DDX20.
   
 0.918
X975_14849
Survival motor neuron protein.
   
 0.895
X975_09622
Gem-associated protein 2.
    
 0.846
X975_11903
Gem-associated protein 2.
    
 0.846
X975_13747
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
    
 0.839
X975_05410
Small nuclear ribonucleoprotein Sm D2.
    
 0.834
X975_21066
Gem-associated protein 2.
    
 0.824
X975_23142
Tetratricopeptide repeat protein 37.
    
 0.818
Your Current Organism:
Stegodyphus mimosarum
NCBI taxonomy Id: 407821
Other names: S. mimosarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.