STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X975_02259RNA-binding protein 26. (1025 aa)    
Predicted Functional Partners:
X975_08375
Superkiller viralicidic activity 2-like 2.
   
 
 0.761
X975_08879
YTH domain family protein 1.
    
 
 0.749
X975_18530
Polyadenylate-binding protein 2.
    
 
 0.744
X975_27231
Polyadenylate-binding protein 2.
    
 
 0.744
X975_19883
RNA-binding protein with serine-rich domain 1-B.
    
 
 0.683
X975_10435
RNA-binding protein with serine-rich domain 1-B.
    
 
 0.683
X975_12914
Helicase SKI2W.
   
 
 0.517
X975_12915
Helicase SKI2W.
   
 
 0.517
X975_21222
RNA helicase.
    
 
 0.490
X975_11628
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...]
   
  
 0.449
Your Current Organism:
Stegodyphus mimosarum
NCBI taxonomy Id: 407821
Other names: S. mimosarum
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.