STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X975_12809Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family. (106 aa)    
Predicted Functional Partners:
X975_19282
Putative E3 ubiquitin-protein ligase TRIP12.
   
 0.977
X975_07057
Putative E3 ubiquitin-protein ligase TRIP12.
   
 0.977
X975_07808
Polyubiquitin-C.
   
 0.975
X975_16292
Ubiquitin-60S ribosomal protein L40.
   
 0.973
X975_18159
Ubiquitin-conjugating enzyme E2 variant 2.
   
 0.968
X975_26125
RING-box protein 1.
   
 0.964
X975_15477
STIP1 and U box-containing protein 1.
    
 0.957
X975_00623
Ubiquitin thioesterase OTUB1.
    
 0.954
X975_09293
Ubiquitin thioesterase OTUB1.
    
 0.954
X975_22675
U-box domain-containing protein.
    
 0.940
Your Current Organism:
Stegodyphus mimosarum
NCBI taxonomy Id: 407821
Other names: S. mimosarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.