STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X975_10494Polyribonucleotide 5'-hydroxyl-kinase Clp1. (414 aa)    
Predicted Functional Partners:
X975_19007
Cleavage stimulation factor subunit 3.
    
 0.892
X975_17296
Pre-mRNA 3'-end-processing factor FIP1.
    
 0.883
X975_07835
Cleavage and polyadenylation specificity factor subunit 4.
    
 0.879
X975_21865
Cleavage and polyadenylation specificity factor subunit 3.
   
 0.878
X975_26091
Cleavage stimulation factor subunit 2.
   
 0.860
X975_14911
Cleavage stimulation factor subunit 2.
   
 0.860
X975_17120
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.817
X975_26191
tRNA-splicing endonuclease subunit Sen2.
    
 0.812
X975_19582
2,3-bisphosphoglycerate-independent phosphoglycerate mutase.
    
 0.805
X975_21185
Pre-mRNA cleavage complex 2 protein Pcf11.
    
 0.800
Your Current Organism:
Stegodyphus mimosarum
NCBI taxonomy Id: 407821
Other names: S. mimosarum
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.