STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X975_01070Histone deacetylase complex subunit SAP18. (141 aa)    
Predicted Functional Partners:
X975_01177
Apoptotic chromatin condensation inducer in the nucleus.
   
 0.993
X975_19883
RNA-binding protein with serine-rich domain 1-B.
   
 0.974
X975_10435
RNA-binding protein with serine-rich domain 1-B.
   
 0.974
X975_23729
Pinin.
    
 0.965
X975_18530
Polyadenylate-binding protein 2.
   
 0.886
X975_27231
Polyadenylate-binding protein 2.
   
 0.886
X975_11488
Protein mago nashi-like protein.
   
 0.882
X975_03579
RNA and export factor-binding protein 2.
   
 
 0.876
X975_26076
RNA and export factor-binding protein 2.
   
 
 0.876
X975_11527
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 0.846
Your Current Organism:
Stegodyphus mimosarum
NCBI taxonomy Id: 407821
Other names: S. mimosarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.