X975_14244 protein (Stegodyphus mimosarum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

X975_14244

Magnesium-dependent phosphatase 1. (167 aa)

Predicted Functional Partners:

X975_20812

0.990

X975_27102

0.964

X975_27103

0.964

X975_27104

0.964

X975_27105

0.964

X975_27106

0.964

X975_27107

0.964

X975_05878

0.905

X975_24106

0.891

X975_26587

0.886

Your Current Organism:

Stegodyphus mimosarum

NCBI taxonomy Id: 407821
Other names: S. mimosarum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
X975_05878	X975_14244	A0A087TPW4	A0A087THM6	Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family.	Magnesium-dependent phosphatase 1.	0.905
X975_05878	X975_20812	A0A087TPW4	A0A087UG97	Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family.	Programmed cell death 6-interacting protein.	0.955
X975_05878	X975_24106	A0A087TPW4	A0A087U1K3	Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family.	Charged multivesicular body protein 2a.	0.998
X975_05878	X975_26587	A0A087TPW4	A0A087UX51	Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family.	Charged multivesicular body protein 6.	0.998
X975_05878	X975_27102	A0A087TPW4	A0A087TUZ2	Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family.	Tyrosine-protein phosphatase non-receptor type 23.	0.774
X975_05878	X975_27103	A0A087TPW4	A0A087TUZ3	Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family.	Tyrosine-protein phosphatase non-receptor type 23.	0.774
X975_05878	X975_27104	A0A087TPW4	A0A087TUZ4	Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family.	Tyrosine-protein phosphatase non-receptor type 23.	0.774
X975_05878	X975_27105	A0A087TPW4	A0A087TUZ5	Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family.	Tyrosine-protein phosphatase non-receptor type 23.	0.774
X975_05878	X975_27106	A0A087TPW4	A0A087TUZ6	Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family.	Tyrosine-protein phosphatase non-receptor type 23.	0.774
X975_05878	X975_27107	A0A087TPW4	A0A087TUZ7	Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family.	Tyrosine-protein phosphatase non-receptor type 23.	0.774
X975_14244	X975_05878	A0A087THM6	A0A087TPW4	Magnesium-dependent phosphatase 1.	Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family.	0.905
X975_14244	X975_20812	A0A087THM6	A0A087UG97	Magnesium-dependent phosphatase 1.	Programmed cell death 6-interacting protein.	0.990
X975_14244	X975_24106	A0A087THM6	A0A087U1K3	Magnesium-dependent phosphatase 1.	Charged multivesicular body protein 2a.	0.891
X975_14244	X975_26587	A0A087THM6	A0A087UX51	Magnesium-dependent phosphatase 1.	Charged multivesicular body protein 6.	0.886
X975_14244	X975_27102	A0A087THM6	A0A087TUZ2	Magnesium-dependent phosphatase 1.	Tyrosine-protein phosphatase non-receptor type 23.	0.964
X975_14244	X975_27103	A0A087THM6	A0A087TUZ3	Magnesium-dependent phosphatase 1.	Tyrosine-protein phosphatase non-receptor type 23.	0.964
X975_14244	X975_27104	A0A087THM6	A0A087TUZ4	Magnesium-dependent phosphatase 1.	Tyrosine-protein phosphatase non-receptor type 23.	0.964
X975_14244	X975_27105	A0A087THM6	A0A087TUZ5	Magnesium-dependent phosphatase 1.	Tyrosine-protein phosphatase non-receptor type 23.	0.964
X975_14244	X975_27106	A0A087THM6	A0A087TUZ6	Magnesium-dependent phosphatase 1.	Tyrosine-protein phosphatase non-receptor type 23.	0.964
X975_14244	X975_27107	A0A087THM6	A0A087TUZ7	Magnesium-dependent phosphatase 1.	Tyrosine-protein phosphatase non-receptor type 23.	0.964