STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X975_08746E3 ubiquitin-protein ligase MIB2. (931 aa)    
Predicted Functional Partners:
X975_09582
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.997
X975_16292
Ubiquitin-60S ribosomal protein L40.
    
 0.997
X975_25027
E3 ubiquitin-protein ligase parkin.
    
 0.992
X975_03249
Ubiquitin carboxyl-terminal hydrolase CYLD.
    
 0.989
X975_21841
AN1-type zinc finger protein 4.
   
 0.980
X975_27001
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.972
X975_25461
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.972
X975_18177
Microtubule-associated proteins 1A/1B light chain 3C.
   
 0.964
X975_04834
Microtubule-associated proteins 1A/1B light chain 3A.
   
 0.964
X975_25930
Microtubule-associated proteins 1A/1B light chain 3C.
   
 0.964
Your Current Organism:
Stegodyphus mimosarum
NCBI taxonomy Id: 407821
Other names: S. mimosarum
Server load: low (16%) [HD]