Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
X975_01773 | X975_03071 | A0A087T757 | A0A087TW14 | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair. | Zinc finger protein 45. | 0.587 |
X975_01773 | X975_09582 | A0A087T757 | A0A087SVZ3 | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.522 |
X975_01773 | X975_16925 | A0A087T757 | A0A087TQX7 | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair. | Actin-like protein 6A; Belongs to the actin family. | 0.999 |
X975_01773 | X975_19288 | A0A087T757 | A0A087TH52 | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair. | Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. | 0.999 |
X975_03071 | X975_01773 | A0A087TW14 | A0A087T757 | Zinc finger protein 45. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair. | 0.587 |
X975_03071 | X975_06295 | A0A087TW14 | A0A087U799 | Zinc finger protein 45. | Casein kinase I isoform alpha; Belongs to the protein kinase superfamily. | 0.539 |
X975_03071 | X975_09582 | A0A087TW14 | A0A087SVZ3 | Zinc finger protein 45. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.719 |
X975_03071 | X975_09756 | A0A087TW14 | A0A087T0A0 | Zinc finger protein 45. | Suppressor of fused-like protein. | 0.595 |
X975_03071 | X975_16925 | A0A087TW14 | A0A087TQX7 | Zinc finger protein 45. | Actin-like protein 6A; Belongs to the actin family. | 0.551 |
X975_03071 | X975_19288 | A0A087TW14 | A0A087TH52 | Zinc finger protein 45. | Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. | 0.569 |
X975_03071 | X975_22198 | A0A087TW14 | A0A087U1I8 | Zinc finger protein 45. | Muscle M-line assembly protein unc-89. | 0.642 |
X975_03071 | X975_22199 | A0A087TW14 | A0A087U1I9 | Zinc finger protein 45. | Muscle M-line assembly protein unc-89. | 0.642 |
X975_03071 | X975_23332 | A0A087TW14 | A0A087SXS6 | Zinc finger protein 45. | Protection of telomeres protein 1. | 0.541 |
X975_03071 | X975_23378 | A0A087TW14 | A0A087T0M5 | Zinc finger protein 45. | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.587 |
X975_06295 | X975_03071 | A0A087U799 | A0A087TW14 | Casein kinase I isoform alpha; Belongs to the protein kinase superfamily. | Zinc finger protein 45. | 0.539 |
X975_06295 | X975_09582 | A0A087U799 | A0A087SVZ3 | Casein kinase I isoform alpha; Belongs to the protein kinase superfamily. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.594 |
X975_06295 | X975_09756 | A0A087U799 | A0A087T0A0 | Casein kinase I isoform alpha; Belongs to the protein kinase superfamily. | Suppressor of fused-like protein. | 0.908 |
X975_09582 | X975_01773 | A0A087SVZ3 | A0A087T757 | Leucine-rich repeat serine/threonine-protein kinase 1. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair. | 0.522 |
X975_09582 | X975_03071 | A0A087SVZ3 | A0A087TW14 | Leucine-rich repeat serine/threonine-protein kinase 1. | Zinc finger protein 45. | 0.719 |
X975_09582 | X975_06295 | A0A087SVZ3 | A0A087U799 | Leucine-rich repeat serine/threonine-protein kinase 1. | Casein kinase I isoform alpha; Belongs to the protein kinase superfamily. | 0.594 |
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