STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X975_12439Erlin-2-B. (339 aa)    
Predicted Functional Partners:
X975_10572
E3 ubiquitin-protein ligase RNF185.
   
 0.866
X975_09843
Tetratricopeptide repeat protein 35.
 
    
 0.861
X975_00500
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.737
X975_05565
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
 
      0.727
X975_03266
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.726
X975_05364
Protein sel-1-like protein.
     
 0.724
X975_07808
Polyubiquitin-C.
    
 0.720
X975_11289
Protein OS-9.
     
 0.717
X975_00611
THAP domain-containing protein 1.
    
 
 0.681
X975_06751
RING finger protein 170.
    
 
 0.681
Your Current Organism:
Stegodyphus mimosarum
NCBI taxonomy Id: 407821
Other names: S. mimosarum
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