STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X975_21765ATP-dependent RNA helicase DDX19A. (327 aa)    
Predicted Functional Partners:
X975_16228
Nucleoporin GLE1.
    
 
 0.958
X975_27150
Nuclear pore complex protein Nup214.
    
 
 0.907
X975_27151
Nuclear pore complex protein Nup214.
    
 
 0.907
X975_27152
Nuclear pore complex protein Nup214.
    
 
 0.907
X975_05821
MIF4G domain-containing protein A.
    
   0.877
X975_11536
CBP80/20-dependent translation initiation factor.
    
   0.877
X975_23926
Putative ATP-dependent RNA helicase DDX5.
  
 0.836
X975_07703
Putative ATP-dependent RNA helicase DDX47.
  
 
 0.735
X975_11630
ATP-dependent RNA helicase DDX51; Belongs to the DEAD box helicase family.
  
0.732
X975_23925
Putative ATP-dependent RNA helicase DDX17.
  
0.730
Your Current Organism:
Stegodyphus mimosarum
NCBI taxonomy Id: 407821
Other names: S. mimosarum
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