STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X975_10253Down syndrome critical region protein 3-like protein. (297 aa)    
Predicted Functional Partners:
X975_13891
Coiled-coil domain-containing protein 22-like protein.
   
 
 0.940
X975_13168
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
   
 
 0.940
X975_19964
Coiled-coil domain-containing protein 93.
    
 
 0.936
X975_06330
COMM domain-containing protein 4.
    
 
 0.926
X975_19808
COMM domain-containing protein 3.
    
 
 0.924
X975_00634
COMM domain-containing protein 2.
    
 
 0.823
X975_22471
Protein FAM45A.
    
 
 0.805
X975_06477
Uncharacterized protein.
   
 
 0.764
X975_06478
Uncharacterized protein.
   
 
 0.764
X975_04826
COMM domain-containing protein 10.
    
 
 0.734
Your Current Organism:
Stegodyphus mimosarum
NCBI taxonomy Id: 407821
Other names: S. mimosarum
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