STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X975_07873Alanine--tRNA ligase, cytoplasmic. (225 aa)    
Predicted Functional Partners:
X975_14087
Cell division cycle protein 16-like protein.
   
 0.954
X975_07874
Alanine--tRNA ligase, cytoplasmic.
 
     0.947
X975_20272
Anaphase-promoting complex subunit 2; Belongs to the cullin family.
    
 0.941
X975_23058
Protein FAM89A.
    
 0.910
X975_15412
Mitotic checkpoint serine/threonine-protein kinase BUB1 beta.
    
 0.890
X975_22373
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
    
 0.885
X975_13557
Anaphase-promoting complex subunit 7.
   
 0.882
X975_02394
Anaphase-promoting complex subunit 13.
    
 0.872
X975_25725
Anaphase-promoting complex subunit 5.
   
 0.852
X975_25726
Anaphase-promoting complex subunit 5.
   
 0.852
Your Current Organism:
Stegodyphus mimosarum
NCBI taxonomy Id: 407821
Other names: S. mimosarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.