Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
X975_00911 | X975_01303 | A0A087TV11 | A0A087SXV9 | Set1/Ash2 histone methyltransferase complex subunit ASH2. | Polycomb protein eed-B. | 0.503 |
X975_00911 | X975_05389 | A0A087TV11 | A0A087TC58 | Set1/Ash2 histone methyltransferase complex subunit ASH2. | Histone-binding protein RBBP4. | 0.554 |
X975_00911 | X975_10145 | A0A087TV11 | A0A087TY24 | Set1/Ash2 histone methyltransferase complex subunit ASH2. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.970 |
X975_00911 | X975_11886 | A0A087TV11 | A0A087SYE4 | Set1/Ash2 histone methyltransferase complex subunit ASH2. | Lysine-specific demethylase 6A. | 0.982 |
X975_00911 | X975_16113 | A0A087TV11 | A0A087UGJ0 | Set1/Ash2 histone methyltransferase complex subunit ASH2. | Transposable element Tc3 transposase. | 0.737 |
X975_00911 | X975_16292 | A0A087TV11 | A0A087U0P7 | Set1/Ash2 histone methyltransferase complex subunit ASH2. | Ubiquitin-60S ribosomal protein L40. | 0.937 |
X975_00911 | X975_21627 | A0A087TV11 | A0A087UNE3 | Set1/Ash2 histone methyltransferase complex subunit ASH2. | Polycomb protein Suz12. | 0.555 |
X975_00911 | X975_21628 | A0A087TV11 | A0A087UNE4 | Set1/Ash2 histone methyltransferase complex subunit ASH2. | Polycomb protein suz12. | 0.555 |
X975_00911 | X975_21657 | A0A087TV11 | A0A087UHZ2 | Set1/Ash2 histone methyltransferase complex subunit ASH2. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.979 |
X975_01303 | X975_00911 | A0A087SXV9 | A0A087TV11 | Polycomb protein eed-B. | Set1/Ash2 histone methyltransferase complex subunit ASH2. | 0.503 |
X975_01303 | X975_05389 | A0A087SXV9 | A0A087TC58 | Polycomb protein eed-B. | Histone-binding protein RBBP4. | 0.983 |
X975_01303 | X975_10145 | A0A087SXV9 | A0A087TY24 | Polycomb protein eed-B. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.765 |
X975_01303 | X975_11886 | A0A087SXV9 | A0A087SYE4 | Polycomb protein eed-B. | Lysine-specific demethylase 6A. | 0.890 |
X975_01303 | X975_16113 | A0A087SXV9 | A0A087UGJ0 | Polycomb protein eed-B. | Transposable element Tc3 transposase. | 0.655 |
X975_01303 | X975_16292 | A0A087SXV9 | A0A087U0P7 | Polycomb protein eed-B. | Ubiquitin-60S ribosomal protein L40. | 0.614 |
X975_01303 | X975_21627 | A0A087SXV9 | A0A087UNE3 | Polycomb protein eed-B. | Polycomb protein Suz12. | 0.973 |
X975_01303 | X975_21628 | A0A087SXV9 | A0A087UNE4 | Polycomb protein eed-B. | Polycomb protein suz12. | 0.973 |
X975_01303 | X975_21657 | A0A087SXV9 | A0A087UHZ2 | Polycomb protein eed-B. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.845 |
X975_05389 | X975_00911 | A0A087TC58 | A0A087TV11 | Histone-binding protein RBBP4. | Set1/Ash2 histone methyltransferase complex subunit ASH2. | 0.554 |
X975_05389 | X975_01303 | A0A087TC58 | A0A087SXV9 | Histone-binding protein RBBP4. | Polycomb protein eed-B. | 0.983 |
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