STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X975_12013Lamin Dm0; Belongs to the intermediate filament family. (602 aa)    
Predicted Functional Partners:
X975_09287
Barrier-to-autointegration factor.
   
 0.965
X975_14797
Inner nuclear membrane protein Man1.
    
 0.933
X975_11688
SUN domain-containing protein 1.
    
 0.860
X975_03181
Myosin light chain kinase, smooth muscle.
    
 0.835
X975_05222
RNA-binding protein 39.
   
 0.804
X975_12294
RNA-binding protein 39.
   
 0.804
X975_20248
Rho GTPase-activating protein 39.
    
 0.797
X975_12887
Caspase-1; Belongs to the peptidase C14A family.
    
 0.762
X975_12889
Caspase-7; Belongs to the peptidase C14A family.
    
 0.762
X975_12890
Caspase-1; Belongs to the peptidase C14A family.
    
 0.762
Your Current Organism:
Stegodyphus mimosarum
NCBI taxonomy Id: 407821
Other names: S. mimosarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.