STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X975_05460Transmembrane protein 53. (192 aa)    
Predicted Functional Partners:
X975_16512
RNA-binding protein 28.
      
 0.529
X975_17872
Zinc finger BED domain-containing protein 1.
      
 0.432
X975_13247
Zinc finger BED domain-containing protein 1.
      
 0.432
X975_00390
DNA repair protein XRCC3.
      
 0.420
X975_06454
Paired box protein Pax-7.
      
 0.416
X975_16440
Leucine-rich repeat-containing protein 4.
      
 0.412
Your Current Organism:
Stegodyphus mimosarum
NCBI taxonomy Id: 407821
Other names: S. mimosarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.