STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X975_21464RNA pseudouridylate synthase domain-containing protein 1. (252 aa)    
Predicted Functional Partners:
X975_04874
Uncharacterized protein.
  
 
 0.902
X975_18370
39S ribosomal protein L17, mitochondrial.
   
   0.880
X975_03717
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.880
X975_13253
39S ribosomal protein L21, mitochondrial.
   
   0.880
X975_14401
Pseudouridylate synthase 7-like protein.
    
 
 0.794
X975_08165
39S ribosomal protein L3, mitochondrial.
   
 
 0.790
X975_24147
tRNA modification GTPase GTPBP3, mitochondrial.
   
 
 0.785
X975_14611
39S ribosomal protein L13, mitochondrial.
  
   0.762
X975_11395
RNA methyltransferase-like protein 1.
  
 
 0.740
X975_12046
Mitochondrial GTPase 1.
   
 
 0.717
Your Current Organism:
Stegodyphus mimosarum
NCBI taxonomy Id: 407821
Other names: S. mimosarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.