STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X975_22989Zinc finger MYM-type protein 1. (393 aa)    
Predicted Functional Partners:
X975_11648
Bifunctional glutamate/proline--tRNA ligase.
  
 
 0.756
X975_10975
Tyrosine--tRNA ligase, cytoplasmic.
  
 
 0.743
X975_26739
Tyrosine--tRNA ligase, cytoplasmic.
  
 
 0.743
X975_01957
Tyrosine--tRNA ligase, cytoplasmic.
  
 
 0.743
X975_14571
Tyrosine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.743
X975_03687
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.710
X975_15859
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.694
X975_11549
39S ribosomal protein L22, mitochondrial; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.694
X975_05897
28S ribosomal protein S15, mitochondrial; Belongs to the universal ribosomal protein uS15 family.
  
 
 0.680
X975_08165
39S ribosomal protein L3, mitochondrial.
   
 
 0.677
Your Current Organism:
Stegodyphus mimosarum
NCBI taxonomy Id: 407821
Other names: S. mimosarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.