STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X975_19583Ataxin-2. (908 aa)    
Predicted Functional Partners:
X975_25358
Protein LSM12-like protein.
    
 0.987
X975_23002
Putative ATP-dependent RNA helicase me31b; Belongs to the DEAD box helicase family.
    
 
 0.946
X975_25528
tRNA selenocysteine 1-associated protein 1.
    
 
 0.925
X975_02472
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 
 0.921
X975_10610
Polyadenylate-binding protein, cytoplasmic and nuclear.
   
 
 0.921
X975_07387
Uncharacterized protein.
    
 0.901
X975_12085
Small nuclear ribonucleoprotein-associated protein B.
    
 
 0.873
X975_15203
Small nuclear ribonucleoprotein-associated protein B.
    
 
 0.873
X975_15204
Small nuclear ribonucleoprotein-associated protein B.
    
 
 0.873
X975_19418
LSM domain-containing protein 1.
    
 
 0.871
Your Current Organism:
Stegodyphus mimosarum
NCBI taxonomy Id: 407821
Other names: S. mimosarum
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