X975_06750 protein (Stegodyphus mimosarum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

X975_06750

FAS-associated factor 1. (462 aa)

Predicted Functional Partners:

X975_19696

0.995

X975_18683

0.987

X975_24628

0.986

X975_00446

0.983

X975_26435

0.982

X975_03777

0.982

X975_10680

0.960

X975_01279

0.954

X975_01280

0.954

X975_01346

0.951

Your Current Organism:

Stegodyphus mimosarum

NCBI taxonomy Id: 407821
Other names: S. mimosarum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
X975_00446	X975_01279	A0A087UMD1	A0A087UT72	Tether containing UBX domain for GLUT4.	Ubiquitin fusion degradation protein 1-like protein.	0.530
X975_00446	X975_01280	A0A087UMD1	A0A087UT73	Tether containing UBX domain for GLUT4.	Ubiquitin fusion degradation protein 1-like protein.	0.530
X975_00446	X975_03777	A0A087UMD1	A0A087U6G4	Tether containing UBX domain for GLUT4.	UBX domain-containing protein 1-A.	0.810
X975_00446	X975_06750	A0A087UMD1	A0A087UJM0	Tether containing UBX domain for GLUT4.	FAS-associated factor 1.	0.983
X975_00446	X975_10680	A0A087UMD1	A0A087U5J5	Tether containing UBX domain for GLUT4.	Nuclear protein localization protein 4-like protein.	0.963
X975_00446	X975_18683	A0A087UMD1	A0A087UFN8	Tether containing UBX domain for GLUT4.	NSFL1 cofactor p47.	0.988
X975_00446	X975_19696	A0A087UMD1	A0A087ULG8	Tether containing UBX domain for GLUT4.	UBX domain-containing protein 7.	0.983
X975_00446	X975_24628	A0A087UMD1	A0A087UF33	Tether containing UBX domain for GLUT4.	UBX domain-containing protein 6.	0.961
X975_00446	X975_26435	A0A087UMD1	A0A087TC14	Tether containing UBX domain for GLUT4.	UBX domain-containing protein 1-A.	0.810
X975_01279	X975_00446	A0A087UT72	A0A087UMD1	Ubiquitin fusion degradation protein 1-like protein.	Tether containing UBX domain for GLUT4.	0.530
X975_01279	X975_01346	A0A087UT72	A0A087UBZ5	Ubiquitin fusion degradation protein 1-like protein.	Ubiquitin-associated domain-containing protein 2.	0.926
X975_01279	X975_03777	A0A087UT72	A0A087U6G4	Ubiquitin fusion degradation protein 1-like protein.	UBX domain-containing protein 1-A.	0.504
X975_01279	X975_06750	A0A087UT72	A0A087UJM0	Ubiquitin fusion degradation protein 1-like protein.	FAS-associated factor 1.	0.954
X975_01279	X975_10680	A0A087UT72	A0A087U5J5	Ubiquitin fusion degradation protein 1-like protein.	Nuclear protein localization protein 4-like protein.	0.993
X975_01279	X975_18683	A0A087UT72	A0A087UFN8	Ubiquitin fusion degradation protein 1-like protein.	NSFL1 cofactor p47.	0.940
X975_01279	X975_19696	A0A087UT72	A0A087ULG8	Ubiquitin fusion degradation protein 1-like protein.	UBX domain-containing protein 7.	0.999
X975_01279	X975_24628	A0A087UT72	A0A087UF33	Ubiquitin fusion degradation protein 1-like protein.	UBX domain-containing protein 6.	0.514
X975_01279	X975_26435	A0A087UT72	A0A087TC14	Ubiquitin fusion degradation protein 1-like protein.	UBX domain-containing protein 1-A.	0.504
X975_01280	X975_00446	A0A087UT73	A0A087UMD1	Ubiquitin fusion degradation protein 1-like protein.	Tether containing UBX domain for GLUT4.	0.530
X975_01280	X975_01346	A0A087UT73	A0A087UBZ5	Ubiquitin fusion degradation protein 1-like protein.	Ubiquitin-associated domain-containing protein 2.	0.926