STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X975_12390General transcription factor IIH subunit 1. (553 aa)    
Predicted Functional Partners:
X975_03384
DNA excision repair protein haywire.
   
 0.999
X975_25546
General transcription factor IIE subunit 1.
   
 0.999
X975_13465
TFIIH basal transcription factor complex helicase XPD subunit.
    
 0.999
X975_20125
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.999
X975_07593
General transcription factor IIH subunit 2.
    
 0.999
X975_25185
General transcription factor IIE subunit 2.
    
 0.999
X975_07768
DNA-directed RNA polymerase II subunit RPB9; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
  0.997
X975_07552
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
    
 0.997
X975_26246
Cyclin-H; Belongs to the cyclin family.
    
 0.997
X975_08277
Transcription initiation factor IIA subunit 2.
    
 0.997
Your Current Organism:
Stegodyphus mimosarum
NCBI taxonomy Id: 407821
Other names: S. mimosarum
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.