STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X975_20094Regulation of nuclear pre-mRNA domain-containing protein 2. (899 aa)    
Predicted Functional Partners:
X975_24910
Putative RNA polymerase II subunit B1 CTD phosphatase rpap2.
   
 0.989
X975_00947
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.973
X975_22514
DNA-directed RNA polymerase II subunit RPB7.
    
  0.958
X975_07768
DNA-directed RNA polymerase II subunit RPB9; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.898
X975_07552
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
    
  0.893
X975_05628
DNA-directed RNA polymerase II subunit RPB3.
    
 0.874
X975_13227
DNA-directed RNA polymerase II subunit RPB11.
    
  0.855
X975_20108
RNA polymerase II subunit A C-terminal domain phosphatase SSU72.
    
 0.848
X975_01955
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
    
  0.845
X975_07557
Transcription elongation factor SPT5.
   
 0.843
Your Current Organism:
Stegodyphus mimosarum
NCBI taxonomy Id: 407821
Other names: S. mimosarum
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