STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X975_12554Putative RNA-binding protein 18. (197 aa)    
Predicted Functional Partners:
X975_00901
LIM domain-binding protein 2.
    
 0.762
X975_05167
LIM domain-binding protein 2.
    
 0.762
X975_04194
Myotubularin-related protein 8.
    
  0.660
X975_13644
LIM/homeobox protein Lhx4.
    
 0.640
X975_20254
LIM/homeobox protein Lhx3.
    
 0.640
X975_06374
Homeobox protein engrailed-like.
   
 0.639
X975_16914
Serum response factor.
    
 0.620
X975_00576
Uncharacterized protein.
    
 0.620
X975_14848
GATA-binding factor A.
    
 0.606
X975_25836
Transcription factor GATA-6.
    
 0.606
Your Current Organism:
Stegodyphus mimosarum
NCBI taxonomy Id: 407821
Other names: S. mimosarum
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