X975_16451 protein (Stegodyphus mimosarum) - STRING interaction network

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Known Interactions

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Predicted Interactions

gene neighborhood

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Your Input:

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Score

X975_16451

F-box/WD repeat-containing protein 9. (407 aa)

Predicted Functional Partners:

X975_21897

0.969

X975_26125

0.968

X975_07808

0.930

X975_06769

0.903

X975_10023

0.840

X975_26441

0.840

X975_04106

0.831

X975_04107

0.831

X975_16292

0.818

X975_03279

0.806

Your Current Organism:

Stegodyphus mimosarum

NCBI taxonomy Id: 407821
Other names: S. mimosarum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
X975_03279	X975_04106	A0A087TLI7	A0A087UX22	RING-box protein 2.	Cullin-3.	0.899
X975_03279	X975_04107	A0A087TLI7	A0A087UX23	RING-box protein 2.	Cullin-3-A; Belongs to the cullin family.	0.926
X975_03279	X975_06769	A0A087TLI7	A0A087U833	RING-box protein 2.	Cell division control protein 6-like protein.	0.691
X975_03279	X975_07808	A0A087TLI7	A0A087TZZ0	RING-box protein 2.	Polyubiquitin-C.	0.856
X975_03279	X975_10023	A0A087TLI7	A0A087TQA5	RING-box protein 2.	Cullin-1; Belongs to the cullin family.	0.920
X975_03279	X975_16292	A0A087TLI7	A0A087U0P7	RING-box protein 2.	Ubiquitin-60S ribosomal protein L40.	0.875
X975_03279	X975_16451	A0A087TLI7	A0A087UM18	RING-box protein 2.	F-box/WD repeat-containing protein 9.	0.806
X975_03279	X975_21897	A0A087TLI7	A0A087UD75	RING-box protein 2.	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.983
X975_03279	X975_26125	A0A087TLI7	A0A087TII7	RING-box protein 2.	RING-box protein 1.	0.817
X975_03279	X975_26441	A0A087TLI7	A0A087UF29	RING-box protein 2.	Cullin-1; Belongs to the cullin family.	0.920
X975_04106	X975_03279	A0A087UX22	A0A087TLI7	Cullin-3.	RING-box protein 2.	0.899
X975_04106	X975_06769	A0A087UX22	A0A087U833	Cullin-3.	Cell division control protein 6-like protein.	0.759
X975_04106	X975_07808	A0A087UX22	A0A087TZZ0	Cullin-3.	Polyubiquitin-C.	0.855
X975_04106	X975_16292	A0A087UX22	A0A087U0P7	Cullin-3.	Ubiquitin-60S ribosomal protein L40.	0.861
X975_04106	X975_16451	A0A087UX22	A0A087UM18	Cullin-3.	F-box/WD repeat-containing protein 9.	0.831
X975_04106	X975_21897	A0A087UX22	A0A087UD75	Cullin-3.	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.973
X975_04106	X975_26125	A0A087UX22	A0A087TII7	Cullin-3.	RING-box protein 1.	0.973
X975_04107	X975_03279	A0A087UX23	A0A087TLI7	Cullin-3-A; Belongs to the cullin family.	RING-box protein 2.	0.926
X975_04107	X975_06769	A0A087UX23	A0A087U833	Cullin-3-A; Belongs to the cullin family.	Cell division control protein 6-like protein.	0.759
X975_04107	X975_07808	A0A087UX23	A0A087TZZ0	Cullin-3-A; Belongs to the cullin family.	Polyubiquitin-C.	0.913

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Network Stats

number of nodes:

11

number of edges:

40

average node degree:

7.27

avg. local clustering coefficient:

0.868

expected number of edges:

15

PPI enrichment p-value:

6.42e-08

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0051537

2 iron, 2 sulfur cluster binding

4 of 22

1.67

1.47

0.00058

GO:0051536

Iron-sulfur cluster binding

5 of 72

1.25

1.06

0.0012

GO:0016491

Oxidoreductase activity

9 of 356

0.81

0.72

0.00025

GO:0046872

Metal ion binding

7 of 425

0.63

0.37

0.0448

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:1516

Mixed, incl. Rieske [2Fe-2S] domain, and Nitrotoluene catabolic process

5 of 7

2.27

3.39

1.55e-07

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map01120

Microbial metabolism in diverse environments

7 of 253

0.85

0.69

0.0015

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0001

2Fe-2S

2 of 6

1.93

0.77

0.0350

KW-0186

Copper

2 of 7

1.87

0.76

0.0350

KW-0411

Iron-sulfur

3 of 35

1.34

0.67

0.0350

KW-0408

Iron

4 of 77

1.13

0.6

0.0350

KW-0560

Oxidoreductase

4 of 124

0.92

0.5

0.0408

(more ...)

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR036010

2Fe-2S ferredoxin-like superfamily

3 of 9

1.93

1.01

0.0113

IPR001041

2Fe-2S ferredoxin-type iron-sulfur binding domain

3 of 9

1.93

1.01

0.0113

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