STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X975_04361DNA ligase. (921 aa)    
Predicted Functional Partners:
X975_21623
DNA repair protein XRCC1.
   
 0.980
X975_14658
DNA repair protein XRCC1.
   
 0.980
X975_23333
DNA repair protein XRCC1.
   
 0.980
X975_02231
X-ray repair cross-complementing protein 5.
   
 0.976
X975_12992
XRCC1_N domain-containing protein.
   
 0.973
X975_12714
Proliferating cell nuclear antigen.
   
 0.972
X975_12715
Proliferating cell nuclear antigen.
   
 0.972
X975_14131
Flap endonuclease 1.
  
 0.929
X975_04058
Tyrosyl-DNA phosphodiesterase 1.
   
 
 0.920
X975_14858
Uncharacterized protein.
   
 0.910
Your Current Organism:
Stegodyphus mimosarum
NCBI taxonomy Id: 407821
Other names: S. mimosarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.