STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X975_09056Nicolin-1. (219 aa)    
Predicted Functional Partners:
X975_05519
Leucine-rich repeat-containing protein 49.
   
 0.894
X975_12266
Tubulin polyglutamylase complex subunit 1.
    
 0.891
X975_26669
TBC1 domain family member 19.
    
   0.872
X975_12253
DUF3342 domain-containing protein.
    
   0.872
X975_00607
Uncharacterized protein.
    
   0.872
X975_12544
Putative tubulin polyglutamylase TTLL1.
   
 0.812
X975_12546
Putative tubulin polyglutamylase TTLL1.
   
 0.812
X975_16595
Voltage-dependent calcium channel gamma-7 subunit.
    
 0.681
X975_01312
Protein phosphatase 1 regulatory subunit 7.
    
 0.681
X975_03810
Protein smg8.
    
   0.513
Your Current Organism:
Stegodyphus mimosarum
NCBI taxonomy Id: 407821
Other names: S. mimosarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.