STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X975_26605Katanin p60 ATPase-containing subunit A-like 2. (117 aa)    
Predicted Functional Partners:
X975_24776
26S proteasome non-ATPase regulatory subunit 4.
   
 0.999
X975_01408
26S proteasome non-ATPase regulatory subunit 13.
   
 0.999
X975_02892
26S proteasome non-ATPase regulatory subunit 6.
   
 0.999
X975_26864
26S proteasome non-ATPase regulatory subunit 1.
   
 0.998
X975_21244
26S proteasome non-ATPase regulatory subunit 3.
   
 0.998
X975_16292
Ubiquitin-60S ribosomal protein L40.
    
 0.998
X975_08373
26S proteasome non-ATPase regulatory subunit 2.
   
 0.998
X975_14477
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.
   
 0.998
X975_13118
Proteasome subunit beta.
   
 0.998
X975_19696
UBX domain-containing protein 7.
   
 0.998
Your Current Organism:
Stegodyphus mimosarum
NCBI taxonomy Id: 407821
Other names: S. mimosarum
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