STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X975_11143DNA ligase 4; Belongs to the ATP-dependent DNA ligase family. (910 aa)    
Predicted Functional Partners:
X975_02231
X-ray repair cross-complementing protein 5.
   
 0.989
X975_17730
Protein CNPPD1.
    
 0.989
X975_14858
Uncharacterized protein.
   
 0.985
X975_10943
X-ray repair cross-complementing protein 5.
   
 0.985
X975_12714
Proliferating cell nuclear antigen.
   
 0.972
X975_12715
Proliferating cell nuclear antigen.
   
 0.972
X975_09968
DNA-dependent protein kinase catalytic subunit.
    
 0.969
X975_16041
DNA-dependent protein kinase catalytic subunit; Belongs to the PI3/PI4-kinase family.
    
 0.969
X975_16042
DNA-dependent protein kinase catalytic subunit; Belongs to the PI3/PI4-kinase family.
    
 0.969
X975_02816
Protein artemis.
   
 0.935
Your Current Organism:
Stegodyphus mimosarum
NCBI taxonomy Id: 407821
Other names: S. mimosarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.