STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X975_19332Transcription factor GATA-4. (424 aa)    
Predicted Functional Partners:
X975_04593
Homeobox protein Nkx-2.3.
   
 0.864
X975_16914
Serum response factor.
    
 0.803
X975_26819
Protein fork head.
    
 0.802
X975_13824
Rhombotin-1.
    
 0.760
X975_05778
Endothelial transcription factor GATA-2.
  
  
0.732
X975_00576
Uncharacterized protein.
    
 0.720
X975_08074
Histone deacetylase 2.
   
 0.718
X975_01748
Histone deacetylase 8.
   
 0.718
X975_15224
Histone deacetylase 3.
   
 0.718
X975_08746
E3 ubiquitin-protein ligase MIB2.
    
 0.712
Your Current Organism:
Stegodyphus mimosarum
NCBI taxonomy Id: 407821
Other names: S. mimosarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.