STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X975_10813Protoporphyrinogen oxidase. (168 aa)    
Predicted Functional Partners:
X975_21315
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
 
 0.970
X975_09931
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
  
 
 0.945
X975_09932
Ferrochelatase, mitochondrial; Belongs to the ferrochelatase family.
  
 
 0.945
X975_12124
Coproporphyrinogen-III oxidase.
  
 
 0.927
X975_11763
Uncharacterized protein.
  
 
 0.917
X975_02466
Uncharacterized protein.
  
 
 0.917
X975_25752
Ornithine aminotransferase, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
 0.842
X975_10264
Uncharacterized protein.
    
 0.836
X975_16108
Uroporphyrinogen-III synthase.
  
 
 0.819
X975_09527
Amine oxidase [flavin-containing] B.
  
 
 0.700
Your Current Organism:
Stegodyphus mimosarum
NCBI taxonomy Id: 407821
Other names: S. mimosarum
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