STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X975_22386RNA-binding protein 5. (537 aa)    
Predicted Functional Partners:
X975_06409
SURP and G-patch domain-containing protein 1.
   
 0.951
X975_04259
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 
 0.930
X975_24163
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
   
 0.920
X975_24480
RNA helicase.
    
 0.910
X975_17262
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.
   
 0.894
X975_24798
G patch domain and KOW motifs-containing protein.
   
 
 0.887
X975_12398
Nucleolar MIF4G domain-containing protein 1.
   
   0.873
X975_18190
Ribosomal RNA processing protein 36-like protein.
   
   0.873
X975_06171
Digestive organ expansion factor-like protein.
    
   0.872
X975_17221
KRR1 small subunit processome component-like protein.
    
   0.872
Your Current Organism:
Stegodyphus mimosarum
NCBI taxonomy Id: 407821
Other names: S. mimosarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.