STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X975_00056RING finger protein unkempt-like protein. (194 aa)    
Predicted Functional Partners:
X975_14178
RING finger protein unkempt.
 
      0.899
X975_23455
Ubiquitin-conjugating enzyme E2 1; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.603
X975_14167
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.
    
  0.546
X975_16292
Ubiquitin-60S ribosomal protein L40.
    
  0.544
X975_21841
AN1-type zinc finger protein 4.
    
 0.542
X975_24533
NEDD8-activating enzyme E1 catalytic subunit.
    
  0.537
X975_24534
NEDD8-activating enzyme E1 catalytic subunit.
    
  0.537
X975_12938
Ubiquitin-like protein 4A.
    
  0.524
X975_27001
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.524
X975_25461
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.524
Your Current Organism:
Stegodyphus mimosarum
NCBI taxonomy Id: 407821
Other names: S. mimosarum
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